Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_22130 | Not Available | Positive | 4884405 - 4885340 | 35066.4 |
| hypothetical protein | PviCFBP13507_22135 | Not Available | Negative | 4885341 - 4885481 | 5285.98 |
| type 1 glutamine amidotransferase domain-containing protein | PviCFBP13507_22140 | Not Available | Negative | 4885601 - 4886278 | 24194.4 |
| duf4432 domain-containing protein | PviCFBP13507_22145 | Not Available | Negative | 4886444 - 4887658 | 44568.8 |
| transcriptional regulator | PviCFBP13507_22150 | Not Available | Negative | 4887945 - 4889558 | 60516.1 |
| rna-splicing ligase rtcb | PviCFBP13507_22155 | Not Available | Positive | 4889807 - 4891033 | 44780.9 |
| nucleotidyltransferase domain-containing protein | PviCFBP13507_22160 | Not Available | Positive | 4891081 - 4891887 | 30720.4 |
| rna 3'-terminal phosphate cyclase | PviCFBP13507_22165 | Not Available | Positive | 4891884 - 4892909 | 36670.5 |
| hypothetical protein | PviCFBP13507_22170 | Not Available | Negative | 4892883 - 4893218 | 12341.5 |
| hypothetical protein | PviCFBP13507_22175 | Not Available | Negative | 4893277 - 4894209 | 34702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
