Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator glcc | PviCFBP13507_22080 | Not Available | Positive | 4873229 - 4873996 | 28661.4 |
| maleylacetoacetate isomerase | PviCFBP13507_22085 | Not Available | Positive | 4874124 - 4874759 | 23589.1 |
| 4-hydroxyphenylpyruvate dioxygenase | PviCFBP13507_22090 | Not Available | Positive | 4874903 - 4875979 | 40273.2 |
| iclr family transcriptional regulator | PviCFBP13507_22095 | Not Available | Negative | 4876020 - 4876808 | 27618.6 |
| homogentisate 1,2-dioxygenase | PviCFBP13507_22100 | Not Available | Positive | 4876944 - 4878248 | 48377.2 |
| fumarylacetoacetase | PviCFBP13507_22105 | Not Available | Positive | 4878248 - 4879534 | 46034.6 |
| d-aminoacylase | PviCFBP13507_22110 | Not Available | Negative | 4879550 - 4881013 | 52906.9 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_22115 | Not Available | Negative | 4881044 - 4881652 | 22835.2 |
| hydrolase | PviCFBP13507_22120 | Not Available | Positive | 4881885 - 4883000 | 42431.4 |
| mfs transporter | PviCFBP13507_22125 | Not Available | Positive | 4883108 - 4884337 | 43198.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
