Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon storage regulator | PviCFBP13507_22030 | Not Available | Negative | 4860944 - 4861132 | 6878.42 |
| permease dsdx | PviCFBP13507_22035 | Not Available | Negative | 4861723 - 4863075 | 47495.4 |
| gluconokinase | PviCFBP13507_22040 | Not Available | Negative | 4863179 - 4863667 | 17354.7 |
| laci family transcriptional regulator | PviCFBP13507_22045 | Not Available | Positive | 4863950 - 4864966 | 36451.0 |
| hypothetical protein | PviCFBP13507_22050 | Not Available | Positive | 4865271 - 4866242 | 34727.3 |
| malate synthase g | PviCFBP13507_22055 | Not Available | Negative | 4866366 - 4868549 | 80178.8 |
| hypothetical protein | PviCFBP13507_22060 | Not Available | Negative | 4868706 - 4869113 | 13947.6 |
| glycolate oxidase iron-sulfur subunit | PviCFBP13507_22065 | Not Available | Negative | 4869146 - 4870372 | 44658.9 |
| glycolate oxidase subunit glce | PviCFBP13507_22070 | Not Available | Negative | 4870376 - 4871434 | 37912.6 |
| glycolate oxidase subunit glcd | PviCFBP13507_22075 | Not Available | Negative | 4871434 - 4872933 | 54000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
