Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | PviCFBP13507_21980 | Not Available | Negative | 4851726 - 4852166 | 16435.7 |
| alpha/beta hydrolase | PviCFBP13507_21985 | Not Available | Negative | 4852262 - 4853152 | 32702.3 |
| n-acetyltransferase | PviCFBP13507_21990 | Not Available | Positive | 4853646 - 4854128 | 18370.3 |
| duf1652 domain-containing protein | PviCFBP13507_21995 | Not Available | Positive | 4854854 - 4855132 | 10279.3 |
| pyridine nucleotide-disulfide oxidoreductase | PviCFBP13507_22000 | Not Available | Positive | 4855840 - 4857237 | 50110.1 |
| oxidoreductase | PviCFBP13507_22005 | Not Available | Positive | 4857330 - 4858268 | 33460.5 |
| duf465 domain-containing protein | PviCFBP13507_22010 | Not Available | Positive | 4858326 - 4858565 | 8903.61 |
| hypothetical protein | PviCFBP13507_22015 | Not Available | Negative | 4858648 - 4859499 | 29769.6 |
| phage holin family protein | PviCFBP13507_22020 | Not Available | Negative | 4859496 - 4859915 | 15014.6 |
| hypothetical protein | PviCFBP13507_22025 | Not Available | Negative | 4859915 - 4860694 | 27136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
