Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_21865 | Not Available | Negative | 4828774 - 4829358 | 20952.9 |
| catalase | PviCFBP13507_21870 | Not Available | Negative | 4829425 - 4830957 | 56663.7 |
| n-acetyltransferase | PviCFBP13507_21875 | Not Available | Positive | 4831558 - 4832271 | 26605.1 |
| methyl-accepting chemotaxis protein | PviCFBP13507_21880 | Not Available | Positive | 4832454 - 4834094 | 57913.9 |
| hypothetical protein | PviCFBP13507_21885 | Not Available | Negative | 4834084 - 4834419 | 12643.4 |
| hypothetical protein | PviCFBP13507_21895 | Not Available | Negative | 4835241 - 4835780 | 18253.2 |
| hypothetical protein | PviCFBP13507_21900 | Not Available | Positive | 4836104 - 4836898 | 28433.0 |
| alpha/beta hydrolase | PviCFBP13507_21905 | Not Available | Positive | 4837055 - 4837894 | 30963.3 |
| hypothetical protein | PviCFBP13507_21910 | Not Available | Positive | 4838087 - 4838734 | 23701.6 |
| lysr family transcriptional regulator | PviCFBP13507_21920 | Not Available | Negative | 4839209 - 4840141 | 34674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
