Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose pyrophosphatase nudk | PviCFBP13507_21815 | Not Available | Negative | 4818532 - 4819128 | 22817.2 |
| mfs transporter | PviCFBP13507_21820 | Not Available | Positive | 4819513 - 4820664 | 38995.0 |
| phzf family phenazine biosynthesis protein | PviCFBP13507_21825 | Not Available | Negative | 4820668 - 4821501 | 29348.6 |
| na(+)-translocating nadh-quinone reductase subunit e | PviCFBP13507_21830 | Not Available | Negative | 4821616 - 4822098 | 18156.0 |
| lysr family transcriptional regulator | PviCFBP13507_21835 | Not Available | Positive | 4822198 - 4823082 | 32349.6 |
| hypothetical protein | PviCFBP13507_21840 | Not Available | Positive | 4823203 - 4824330 | 40914.8 |
| hypothetical protein | PviCFBP13507_21845 | Not Available | Positive | 4824330 - 4824707 | 14353.8 |
| hypothetical protein | PviCFBP13507_21850 | Not Available | Positive | 4824903 - 4825118 | 8603.18 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_21855 | Not Available | Positive | 4825564 - 4827504 | 72049.7 |
| manganese catalase family protein | PviCFBP13507_21860 | Not Available | Positive | 4827774 - 4828679 | 32356.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
