Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-carotene hydroxylase | PviCFBP13507_02000 | Not Available | Negative | 464196 - 464732 | 19859.0 |
| lysr family transcriptional regulator | PviCFBP13507_02005 | Not Available | Positive | 464936 - 465886 | 34055.8 |
| fad-dependent oxidoreductase | PviCFBP13507_02010 | Not Available | Positive | 466100 - 467560 | 53073.1 |
| abc transporter permease | PviCFBP13507_02015 | Not Available | Positive | 467557 - 468531 | 35970.6 |
| abc transporter permease | PviCFBP13507_02020 | Not Available | Positive | 468528 - 469448 | 33092.5 |
| methionine abc transporter atp-binding protein | PviCFBP13507_02025 | Not Available | Positive | 469445 - 470449 | 36068.8 |
| peptide abc transporter atp-binding protein | PviCFBP13507_02030 | Not Available | Positive | 470439 - 471452 | 37021.9 |
| abc transporter substrate-binding protein | PviCFBP13507_02035 | Not Available | Positive | 471510 - 473075 | 56916.3 |
| cmd domain protein | PviCFBP13507_02040 | Not Available | Positive | 473141 - 473671 | 18822.6 |
| alkylhydroperoxidase | PviCFBP13507_02045 | Not Available | Positive | 473668 - 474255 | 21434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
