Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i fole2 | PviCFBP13507_21765 | Not Available | Positive | 4807502 - 4808407 | 33080.4 |
| carbonate dehydratase | PviCFBP13507_21770 | Not Available | Positive | 4808419 - 4808979 | 19969.6 |
| hypothetical protein | PviCFBP13507_21775 | Not Available | Positive | 4809072 - 4810238 | 43823.7 |
| lysr family transcriptional regulator | PviCFBP13507_21780 | Not Available | Negative | 4810780 - 4811655 | 31682.7 |
| citrate transporter | PviCFBP13507_21785 | Not Available | Positive | 4811809 - 4813101 | 45692.3 |
| abc transporter substrate-binding protein | PviCFBP13507_21790 | Not Available | Positive | 4813102 - 4814460 | 47824.9 |
| hypothetical protein | PviCFBP13507_21795 | Not Available | Positive | 4814457 - 4814780 | 11643.1 |
| sulp family inorganic anion transporter | PviCFBP13507_21800 | Not Available | Positive | 4814905 - 4816350 | 51475.9 |
| cell division protein zape | PviCFBP13507_21805 | Not Available | Positive | 4816398 - 4817513 | 42276.7 |
| eama family transporter rard | PviCFBP13507_21810 | Not Available | Negative | 4817517 - 4818401 | 32663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
