Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | PviCFBP13507_21715 | Not Available | Negative | 4796415 - 4797938 | 54370.1 |
| hypothetical protein | PviCFBP13507_21720 | Not Available | Positive | 4797972 - 4798193 | 7809.33 |
| peptidase m20 | PviCFBP13507_21725 | Not Available | Negative | 4798194 - 4799342 | 39885.5 |
| m20 peptidase family dipeptidase | PviCFBP13507_21730 | Not Available | Negative | 4799339 - 4800766 | 51404.9 |
| abc transporter atp-binding protein | PviCFBP13507_21735 | Not Available | Negative | 4800763 - 4801773 | 36925.2 |
| abc transporter atp-binding protein | PviCFBP13507_21740 | Not Available | Negative | 4801770 - 4802771 | 36386.6 |
| abc transporter permease | PviCFBP13507_21745 | Not Available | Negative | 4802788 - 4803696 | 32307.7 |
| abc transporter permease | PviCFBP13507_21750 | Not Available | Negative | 4803705 - 4804622 | 33099.4 |
| abc transporter substrate-binding protein | PviCFBP13507_21755 | Not Available | Negative | 4804691 - 4806211 | 56431.9 |
| lysr family transcriptional regulator | PviCFBP13507_21760 | Not Available | Positive | 4806412 - 4807320 | 33275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
