Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnh | PviCFBP13507_21665 | Not Available | Positive | 4786073 - 4786669 | 21388.5 |
| carbon-phosphorus lyase complex subunit phni | PviCFBP13507_21670 | Not Available | Positive | 4786669 - 4787748 | 39722.4 |
| carbon-phosphorus lyase | PviCFBP13507_21675 | Not Available | Positive | 4787745 - 4788617 | 32591.8 |
| phosphonate c-p lyase system protein phnk | PviCFBP13507_21680 | Not Available | Positive | 4788614 - 4789435 | 29982.1 |
| phosphonate c-p lyase system protein phnl | PviCFBP13507_21685 | Not Available | Positive | 4789458 - 4790174 | 26438.1 |
| phosphonate metabolism protein phnm | PviCFBP13507_21690 | Not Available | Positive | 4790168 - 4791313 | 41310.5 |
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | PviCFBP13507_21695 | Not Available | Positive | 4791313 - 4791879 | 20938.0 |
| phosphonate metabolism protein phnp | PviCFBP13507_21700 | Not Available | Positive | 4791870 - 4792619 | 27574.4 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | PviCFBP13507_21705 | Not Available | Positive | 4793026 - 4795386 | 83494.0 |
| aec family transporter | PviCFBP13507_21710 | Not Available | Negative | 4795427 - 4796329 | 31755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
