Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_21565 | Not Available | Positive | 4766614 - 4767519 | 33304.6 |
| hypothetical protein | PviCFBP13507_21570 | Not Available | Positive | 4767510 - 4767854 | 12393.2 |
| hypothetical protein | PviCFBP13507_21575 | Not Available | Positive | 4767826 - 4767942 | 4291.23 |
| nucleoside 2-deoxyribosyltransferase | PviCFBP13507_21580 | Not Available | Negative | 4768392 - 4768889 | 18090.5 |
| nuclease | PviCFBP13507_21585 | Not Available | Positive | 4769060 - 4770760 | 65502.6 |
| hypothetical protein | PviCFBP13507_21590 | Not Available | Negative | 4770850 - 4771152 | 10015.4 |
| hypothetical protein | PviCFBP13507_21595 | Not Available | Negative | 4771275 - 4771571 | 10042.6 |
| phosphate abc transporter substrate-binding protein psts | PviCFBP13507_21600 | Not Available | Positive | 4772098 - 4773120 | 36389.2 |
| phosphate abc transporter permease subunit pstc | PviCFBP13507_21605 | Not Available | Positive | 4773199 - 4774194 | 35696.4 |
| phosphate abc transporter permease ptsa | PviCFBP13507_21610 | Not Available | Positive | 4774191 - 4775075 | 31491.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
