Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | PviCFBP13507_21515 | Not Available | Negative | 4753424 - 4754776 | 49611.2 |
| mfs transporter | PviCFBP13507_21520 | Not Available | Negative | 4754814 - 4756139 | 47834.1 |
| gntr family transcriptional regulator | PviCFBP13507_21525 | Not Available | Positive | 4756620 - 4757333 | 26273.5 |
| alpha/beta hydrolase | PviCFBP13507_21530 | Not Available | Negative | 4757330 - 4758490 | 44069.1 |
| cdar family transcriptional regulator | PviCFBP13507_21535 | Not Available | Positive | 4759155 - 4760246 | 41159.6 |
| glycerate kinase | PviCFBP13507_21540 | Not Available | Positive | 4760357 - 4761496 | 39213.7 |
| alanine acetyltransferase | PviCFBP13507_21545 | Not Available | Negative | 4761684 - 4762166 | 18003.2 |
| methyl-accepting chemotaxis protein | PviCFBP13507_21550 | Not Available | Positive | 4762381 - 4764006 | 58125.1 |
| age family epimerase/isomerase | PviCFBP13507_21555 | Not Available | Positive | 4764126 - 4765370 | 46007.4 |
| hypothetical protein | PviCFBP13507_21560 | Not Available | Negative | 4765386 - 4766456 | 37332.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
