Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PviCFBP13507_21365 | Not Available | Positive | 4718176 - 4719351 | 41117.3 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_21370 | Not Available | Positive | 4719431 - 4720075 | 23756.6 |
| beta-glucosidase | PviCFBP13507_21375 | Not Available | Negative | 4720117 - 4722858 | 98956.8 |
| hypothetical protein | PviCFBP13507_21380 | Not Available | Positive | 4723291 - 4723569 | 9103.86 |
| type ii secretion system protein gspe | PviCFBP13507_21385 | Not Available | Positive | 4723664 - 4725388 | 63434.4 |
| type ii secretion system protein gspf | PviCFBP13507_21390 | Not Available | Positive | 4725385 - 4726587 | 42605.1 |
| type ii secretion system protein gspg | PviCFBP13507_21395 | Not Available | Positive | 4726613 - 4727044 | 15292.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PviCFBP13507_21400 | Not Available | Positive | 4727053 - 4727487 | 15650.1 |
| type ii secretion system protein | PviCFBP13507_21405 | Not Available | Positive | 4727487 - 4727858 | 13312.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PviCFBP13507_21410 | Not Available | Positive | 4727855 - 4728487 | 22381.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
