Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | PviCFBP13507_21265 | Not Available | Positive | 4698556 - 4698930 | 13156.5 |
| serine--trna ligase | PviCFBP13507_21270 | Not Available | Positive | 4698947 - 4700227 | 47194.3 |
| uroporphyrinogen-iii c-methyltransferase | PviCFBP13507_21275 | Not Available | Positive | 4700228 - 4701622 | 50234.8 |
| glutathione-dependent reductase | PviCFBP13507_21280 | Not Available | Negative | 4701669 - 4702667 | 38027.4 |
| glycosyl transferase family protein | PviCFBP13507_21285 | Not Available | Negative | 4702775 - 4703776 | 37162.8 |
| sulfurtransferase tuse | PviCFBP13507_21290 | Not Available | Negative | 4703773 - 4704108 | 12171.9 |
| sulfurtransferase complex subunit tusb | PviCFBP13507_21295 | Not Available | Negative | 4704105 - 4704401 | 10636.6 |
| sulfurtransferase complex subunit tusc | PviCFBP13507_21300 | Not Available | Negative | 4704401 - 4704763 | 12871.5 |
| sulfurtransferase complex subunit tusd | PviCFBP13507_21305 | Not Available | Negative | 4704765 - 4705157 | 14294.9 |
| Trna-ser | Not Available | Not Available | Positive | 4705297 - 4705384 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
