Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | PviCFBP13507_21155 | Not Available | Negative | 4675382 - 4676056 | 25403.6 |
| nadh-quinone oxidoreductase subunit a | PviCFBP13507_21160 | Not Available | Negative | 4676067 - 4676480 | 15143.8 |
| isocitrate lyase | PviCFBP13507_21165 | Not Available | Negative | 4676934 - 4678259 | 48681.4 |
| secretin | PviCFBP13507_21170 | Not Available | Negative | 4678789 - 4679520 | 26195.7 |
| gnat family n-acetyltransferase | PviCFBP13507_21175 | Not Available | Negative | 4679706 - 4680128 | 15701.7 |
| cupin domain-containing protein | PviCFBP13507_21180 | Not Available | Negative | 4680121 - 4681287 | 43814.8 |
| adenylosuccinate lyase | PviCFBP13507_21185 | Not Available | Negative | 4681349 - 4682719 | 50873.9 |
| lysogenization regulator hfld | PviCFBP13507_21190 | Not Available | Negative | 4682850 - 4683470 | 22972.1 |
| trna 2-thiouridine(34) synthase mnma | PviCFBP13507_21195 | Not Available | Negative | 4683470 - 4684600 | 42124.9 |
| nudix hydrolase | PviCFBP13507_21200 | Not Available | Negative | 4684661 - 4685107 | 16811.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
