Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | PviCFBP13507_21045 | Not Available | Negative | 4649830 - 4650786 | 33478.3 |
| duf2254 domain-containing protein | PviCFBP13507_21055 | Not Available | Negative | 4652347 - 4653624 | 46440.5 |
| 6-carboxytetrahydropterin synthase qued | PviCFBP13507_21065 | Not Available | Negative | 4655341 - 4655697 | 13658.3 |
| peptidase | PviCFBP13507_21070 | Not Available | Positive | 4655914 - 4656222 | 11530.8 |
| peptidase | PviCFBP13507_21075 | Not Available | Positive | 4656222 - 4656527 | 11566.9 |
| dna-binding response regulator | PviCFBP13507_21080 | Not Available | Positive | 4656527 - 4657195 | 24479.3 |
| hamp domain-containing protein | PviCFBP13507_21085 | Not Available | Positive | 4657192 - 4658514 | 49113.7 |
| chemotaxis protein | PviCFBP13507_21090 | Not Available | Positive | 4658629 - 4660308 | 59721.2 |
| ai-2e family transporter | PviCFBP13507_21095 | Not Available | Positive | 4660404 - 4661468 | 38921.3 |
| nadh-quinone oxidoreductase subunit nuon | PviCFBP13507_21100 | Not Available | Negative | 4661526 - 4662995 | 51961.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
