Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | PviCFBP13507_20975 | Not Available | Positive | 4639209 - 4639793 | 21941.3 |
| ykgj family cysteine cluster protein | PviCFBP13507_20980 | Not Available | Positive | 4640034 - 4640813 | 28618.2 |
| xre family transcriptional regulator | PviCFBP13507_21000 | Not Available | Positive | 4641799 - 4642116 | 11750.2 |
| type ii toxin-antitoxin system hipa family toxin | PviCFBP13507_21005 | Not Available | Positive | 4642109 - 4643395 | 47545.8 |
| eama/rhat family transporter | PviCFBP13507_21010 | Not Available | Negative | 4643491 - 4644426 | 33380.9 |
| hypothetical protein | PviCFBP13507_21015 | Not Available | Positive | 4644519 - 4644836 | 11494.9 |
| smi1/knr4 family protein | PviCFBP13507_21020 | Not Available | Negative | 4644966 - 4645559 | 22159.9 |
| hypothetical protein | PviCFBP13507_21025 | Not Available | Positive | 4645909 - 4646463 | 19572.8 |
| duf1850 domain-containing protein | PviCFBP13507_21035 | Not Available | Negative | 4647345 - 4647725 | 14070.8 |
| c4-dicarboxylate abc transporter | PviCFBP13507_21040 | Not Available | Negative | 4647722 - 4649749 | 72254.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
