Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PviCFBP13507_20925 | Not Available | Negative | 4629251 - 4630153 | 32538.4 |
| aldo/keto reductase | PviCFBP13507_20930 | Not Available | Positive | 4630304 - 4631374 | 38879.9 |
| nuclear transport factor 2 family protein | PviCFBP13507_20935 | Not Available | Positive | 4631449 - 4631979 | 19019.7 |
| short-chain dehydrogenase/reductase | PviCFBP13507_20940 | Not Available | Positive | 4632110 - 4632964 | 30265.3 |
| haloacid dehalogenase type ii | PviCFBP13507_20945 | Not Available | Positive | 4633055 - 4633774 | 26654.8 |
| opt family oligopeptide transporter | PviCFBP13507_20950 | Not Available | Positive | 4633855 - 4635609 | 61463.2 |
| nudix hydrolase | PviCFBP13507_20955 | Not Available | Negative | 4635942 - 4636385 | 16394.5 |
| n-acetyltransferase | PviCFBP13507_20960 | Not Available | Negative | 4636513 - 4636938 | 15662.9 |
| alkene reductase | PviCFBP13507_20965 | Not Available | Negative | 4637085 - 4638209 | 40939.4 |
| type 1 glutamine amidotransferase domain-containing protein | PviCFBP13507_20970 | Not Available | Negative | 4638324 - 4639001 | 24127.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
