Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase | PviCFBP13507_20825 | Not Available | Positive | 4604156 - 4604995 | 30776.2 |
| glutathione-disulfide reductase | PviCFBP13507_20830 | Not Available | Positive | 4605101 - 4606459 | 49537.6 |
| pas domain-containing sensor histidine kinase | PviCFBP13507_20835 | Not Available | Positive | 4606553 - 4607827 | 47677.8 |
| integrase | PviCFBP13507_20840 | Not Available | Negative | 4607843 - 4608850 | 37820.6 |
| tn3 family resolvase | PviCFBP13507_20845 | Not Available | Positive | 4609027 - 4609986 | 35780.7 |
| peroxiredoxin | PviCFBP13507_20850 | Not Available | Positive | 4610088 - 4610651 | 20516.3 |
| alkyl hydroperoxide reductase subunit f | PviCFBP13507_20855 | Not Available | Positive | 4610784 - 4612346 | 55604.8 |
| lactoylglutathione lyase | PviCFBP13507_20860 | Not Available | Negative | 4612411 - 4612932 | 19468.0 |
| duf4946 domain-containing protein | PviCFBP13507_20865 | Not Available | Positive | 4613087 - 4613638 | 19732.7 |
| transcriptional regulator | PviCFBP13507_20870 | Not Available | Negative | 4614125 - 4614487 | 13432.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
