Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor lexa | PviCFBP13507_01900 | Not Available | Positive | 438740 - 439357 | 22468.2 |
| translesion dna synthesis-associated protein imua | PviCFBP13507_01905 | Not Available | Positive | 439354 - 439977 | 21967.8 |
| dna repair nucleotidyltransferase | PviCFBP13507_01910 | Not Available | Positive | 439985 - 441400 | 53088.3 |
| error-prone dna polymerase | PviCFBP13507_01915 | Not Available | Positive | 441397 - 444492 | 116598.0 |
| duf1989 domain-containing protein | PviCFBP13507_01920 | Not Available | Positive | 444565 - 445416 | 32001.0 |
| hypothetical protein | PviCFBP13507_01925 | Not Available | Positive | 445463 - 445654 | 6834.14 |
| polysaccharide deacetylase | PviCFBP13507_01930 | Not Available | Positive | 445745 - 446644 | 33296.2 |
| peptidase m38 | PviCFBP13507_01935 | Not Available | Negative | 446960 - 448219 | 44476.9 |
| mfs transporter | PviCFBP13507_01940 | Not Available | Negative | 448216 - 449526 | 46752.7 |
| lysr family transcriptional regulator | PviCFBP13507_01945 | Not Available | Negative | 449715 - 450617 | 33434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
