Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | PviCFBP13507_20725 | Not Available | Negative | 4581048 - 4581671 | 23832.9 |
| pig-l family deacetylase | PviCFBP13507_20730 | Not Available | Negative | 4581668 - 4582441 | 28005.2 |
| acyl-coa dehydrogenase | PviCFBP13507_20735 | Not Available | Negative | 4582434 - 4583471 | 36835.6 |
| glycogen debranching enzyme glgx | PviCFBP13507_20740 | Not Available | Negative | 4583468 - 4585651 | 81870.7 |
| duf2934 domain-containing protein | PviCFBP13507_20745 | Not Available | Negative | 4585809 - 4586201 | 13591.2 |
| malto-oligosyltrehalose synthase | PviCFBP13507_20750 | Not Available | Negative | 4586219 - 4589002 | 104565.0 |
| 4-alpha-glucanotransferase | PviCFBP13507_20755 | Not Available | Negative | 4588999 - 4591077 | 75787.1 |
| malto-oligosyltrehalose trehalohydrolase | PviCFBP13507_20760 | Not Available | Negative | 4591067 - 4592884 | 68010.8 |
| glycogen synthase glga | PviCFBP13507_20765 | Not Available | Negative | 4592902 - 4594494 | 58013.2 |
| gnat family n-acetyltransferase | PviCFBP13507_20770 | Not Available | Positive | 4595089 - 4595580 | 17753.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
