Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-sulfatase | PviCFBP13507_20675 | Not Available | Negative | 4573387 - 4573965 | 21930.0 |
| aminotransferase | PviCFBP13507_20680 | Not Available | Negative | 4573962 - 4574525 | 20671.8 |
| undecaprenyl-diphosphatase | PviCFBP13507_20685 | Not Available | Positive | 4574767 - 4575597 | 30376.7 |
| duf1294 domain-containing protein | PviCFBP13507_20690 | Not Available | Positive | 4575594 - 4576034 | 16656.1 |
| mmcq/yjbr family dna-binding protein | PviCFBP13507_20695 | Not Available | Negative | 4576029 - 4576373 | 12867.7 |
| 3-oxoadipate enol-lactonase | PviCFBP13507_20700 | Not Available | Positive | 4576500 - 4577294 | 28349.9 |
| lysr family transcriptional regulator | PviCFBP13507_20705 | Not Available | Positive | 4577334 - 4578293 | 35195.3 |
| fmn-dependent nadh-azoreductase | PviCFBP13507_20710 | Not Available | Positive | 4578366 - 4578974 | 21631.5 |
| dienelactone hydrolase | PviCFBP13507_20715 | Not Available | Positive | 4579313 - 4580383 | 38447.9 |
| glycosyltransferase family 2 protein | PviCFBP13507_20720 | Not Available | Negative | 4580423 - 4581076 | 23461.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
