Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone-dependent pyruvate dehydrogenase | PviCFBP13507_20375 | Not Available | Positive | 4506722 - 4508440 | 61385.0 |
| aldehyde-activating protein | PviCFBP13507_20380 | Not Available | Negative | 4508437 - 4508859 | 15494.5 |
| duf4823 domain-containing protein | PviCFBP13507_20385 | Not Available | Positive | 4509017 - 4509535 | 18462.9 |
| lysr family transcriptional regulator | PviCFBP13507_20390 | Not Available | Positive | 4509793 - 4510719 | 33973.4 |
| antibiotic biosynthesis monooxygenase | PviCFBP13507_20395 | Not Available | Positive | 4510855 - 4511481 | 23334.5 |
| amidohydrolase | PviCFBP13507_20400 | Not Available | Positive | 4511627 - 4513465 | 68016.0 |
| hydrolase | PviCFBP13507_20405 | Not Available | Positive | 4513535 - 4514164 | 22785.1 |
| hypothetical protein | PviCFBP13507_20410 | Not Available | Positive | 4514685 - 4515002 | 12022.1 |
| hypothetical protein | PviCFBP13507_20415 | Not Available | Positive | 4515540 - 4516061 | 19430.5 |
| duf3833 domain-containing protein | PviCFBP13507_20420 | Not Available | Positive | 4516079 - 4516618 | 20344.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
