Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucoamylase | PviCFBP13507_20275 | Not Available | Positive | 4485166 - 4486992 | 69050.6 |
| duf2723 domain-containing protein | PviCFBP13507_20280 | Not Available | Negative | 4487018 - 4488448 | 52189.4 |
| tigr00374 family protein | PviCFBP13507_20285 | Not Available | Negative | 4488545 - 4489504 | 34456.4 |
| short-chain dehydrogenase | PviCFBP13507_20290 | Not Available | Negative | 4489501 - 4490241 | 26510.5 |
| fad-binding oxidoreductase | PviCFBP13507_20295 | Not Available | Negative | 4490238 - 4491554 | 48697.4 |
| ubia family prenyltransferase | PviCFBP13507_20300 | Not Available | Negative | 4491551 - 4493002 | 53772.2 |
| nitric oxide reductase transcriptional regulator norr | PviCFBP13507_20305 | Not Available | Positive | 4493365 - 4494915 | 57182.0 |
| hypothetical protein | PviCFBP13507_20310 | Not Available | Positive | 4495028 - 4495252 | 8703.37 |
| mfs transporter | PviCFBP13507_20315 | Not Available | Negative | 4495271 - 4496689 | 52045.6 |
| divalent metal cation transporter | PviCFBP13507_20320 | Not Available | Positive | 4496993 - 4498312 | 46451.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
