Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | PviCFBP13507_20170 | Not Available | Negative | 4463901 - 4465874 | 73648.2 |
| ubiquinol oxidase subunit ii | PviCFBP13507_20175 | Not Available | Negative | 4465876 - 4466784 | 34003.2 |
| hypothetical protein | PviCFBP13507_20180 | Not Available | Positive | 4467358 - 4467684 | 11825.5 |
| clp protease | PviCFBP13507_20185 | Not Available | Negative | 4467701 - 4468252 | 20153.3 |
| glucose starvation-inducible protein b | PviCFBP13507_20190 | Not Available | Negative | 4468381 - 4468728 | 11590.8 |
| general stress protein | PviCFBP13507_20195 | Not Available | Negative | 4468942 - 4469118 | 5850.56 |
| chemotaxis protein | PviCFBP13507_20200 | Not Available | Positive | 4469897 - 4472032 | 79799.0 |
| chemotaxis protein chew | PviCFBP13507_20205 | Not Available | Positive | 4472029 - 4473507 | 53125.1 |
| hypothetical protein | PviCFBP13507_20210 | Not Available | Positive | 4473584 - 4473709 | 4620.41 |
| gnat family n-acetyltransferase | PviCFBP13507_20215 | Not Available | Negative | 4473777 - 4474259 | 18064.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
