Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | PviCFBP13507_20065 | Not Available | Negative | 4443335 - 4444237 | 32907.3 |
| urea abc transporter substrate-binding protein | PviCFBP13507_20070 | Not Available | Negative | 4444304 - 4445485 | 42575.3 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_20080 | Not Available | Positive | 4446110 - 4447258 | 42738.8 |
| antitermination protein | PviCFBP13507_20085 | Not Available | Positive | 4447255 - 4447887 | 23448.8 |
| amidase | PviCFBP13507_20090 | Not Available | Positive | 4448069 - 4449607 | 54058.4 |
| cysteine hydrolase | PviCFBP13507_20095 | Not Available | Negative | 4450370 - 4450915 | 19223.1 |
| mbl fold metallo-hydrolase | PviCFBP13507_20100 | Not Available | Negative | 4450997 - 4451887 | 32035.3 |
| arac family transcriptional regulator | PviCFBP13507_20105 | Not Available | Positive | 4452011 - 4453039 | 37157.5 |
| arac family transcriptional regulator | PviCFBP13507_20110 | Not Available | Positive | 4453127 - 4454098 | 36456.5 |
| hypothetical protein | PviCFBP13507_20115 | Not Available | Positive | 4454167 - 4455099 | 34182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
