Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_19960 | Not Available | Negative | 4426703 - 4427011 | 10690.7 |
| threonine--trna ligase | PviCFBP13507_19965 | Not Available | Positive | 4427357 - 4429279 | 72635.7 |
| translation initiation factor if-3 | PviCFBP13507_19970 | Not Available | Positive | 4429297 - 4429830 | 20052.5 |
| 50s ribosomal protein l35 | PviCFBP13507_19975 | Not Available | Positive | 4429891 - 4430085 | 7368.38 |
| 50s ribosomal protein l20 | PviCFBP13507_19980 | Not Available | Positive | 4430115 - 4430471 | 13314.6 |
| phenylalanine--trna ligase subunit alpha | PviCFBP13507_19985 | Not Available | Positive | 4430576 - 4431592 | 38172.0 |
| phenylalanine--trna ligase subunit beta | PviCFBP13507_19990 | Not Available | Positive | 4431625 - 4434003 | 86472.0 |
| integration host factor subunit alpha | PviCFBP13507_19995 | Not Available | Positive | 4434007 - 4434309 | 11476.8 |
| merr family transcriptional regulator | PviCFBP13507_20000 | Not Available | Positive | 4434290 - 4434646 | 13992.1 |
| Trna-pro | Not Available | Not Available | Positive | 4434735 - 4434811 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
