Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor guanylyltransferase moba | PviCFBP13507_19810 | Not Available | Negative | 4401474 - 4402079 | 22020.6 |
| molybdenum cofactor biosynthesis protein b | PviCFBP13507_19815 | Not Available | Positive | 4402156 - 4402695 | 19335.1 |
| molybdopterin molybdenumtransferase moea | PviCFBP13507_19820 | Not Available | Positive | 4402702 - 4403913 | 43415.2 |
| rhamnosyltransferase | PviCFBP13507_19825 | Not Available | Positive | 4403997 - 4404923 | 34952.2 |
| emrb/qaca family drug resistance transporter | PviCFBP13507_19830 | Not Available | Positive | 4405604 - 4407148 | 55299.1 |
| efflux transporter periplasmic adaptor subunit | PviCFBP13507_19835 | Not Available | Positive | 4407170 - 4408225 | 36751.4 |
| rnd transporter | PviCFBP13507_19840 | Not Available | Positive | 4408222 - 4409637 | 51559.1 |
| glutathione-regulated potassium-efflux system protein | PviCFBP13507_19845 | Not Available | Negative | 4409639 - 4411450 | 64873.7 |
| hypothetical protein | PviCFBP13507_19850 | Not Available | Positive | 4411704 - 4411892 | 6910.93 |
| fe2+/zn2+ uptake regulation protein | PviCFBP13507_19855 | Not Available | Negative | 4411911 - 4412303 | 14547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
