Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | PviCFBP13507_01800 | Not Available | Positive | 420208 - 420831 | 23487.8 |
| duf3830 domain-containing protein | PviCFBP13507_01805 | Not Available | Positive | 420895 - 421320 | 15528.5 |
| hemerythrin domain-containing protein | PviCFBP13507_01810 | Not Available | Positive | 421407 - 421889 | 18519.6 |
| 2-oxoacid ferredoxin oxidoreductase | PviCFBP13507_01815 | Not Available | Positive | 421938 - 422285 | 11787.1 |
| abc transporter substrate-binding protein | PviCFBP13507_01820 | Not Available | Positive | 422698 - 423549 | 30853.8 |
| amino acid abc transporter permease | PviCFBP13507_01825 | Not Available | Positive | 423615 - 424277 | 24379.7 |
| amino acid abc transporter permease | PviCFBP13507_01830 | Not Available | Positive | 424287 - 424949 | 24333.4 |
| amino acid abc transporter atp-binding protein | PviCFBP13507_01835 | Not Available | Positive | 424946 - 425737 | 29304.8 |
| rida family protein | PviCFBP13507_01840 | Not Available | Positive | 425759 - 426145 | 14156.9 |
| iclr family transcriptional regulator | PviCFBP13507_01845 | Not Available | Positive | 426202 - 426984 | 29229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
