Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | PviCFBP13507_19510 | Not Available | Positive | 4328917 - 4329891 | 36290.9 |
| phosphoadenylyl-sulfate reductase | PviCFBP13507_19515 | Not Available | Negative | 4329961 - 4330695 | 28114.5 |
| bifunctional phosphoserine phosphatase/homoserine phosphotransferase thrh | PviCFBP13507_19520 | Not Available | Positive | 4330870 - 4331487 | 23622.5 |
| aminodeoxychorismate synthase component i | PviCFBP13507_19525 | Not Available | Negative | 4331651 - 4332997 | 49143.5 |
| alpha-l-glutamate ligase-like protein | PviCFBP13507_19530 | Not Available | Negative | 4333094 - 4334074 | 35996.4 |
| hypothetical protein | PviCFBP13507_19535 | Not Available | Negative | 4334071 - 4335609 | 57015.2 |
| atp-dependent zinc protease | PviCFBP13507_19540 | Not Available | Negative | 4335614 - 4336150 | 19722.7 |
| gntr family transcriptional regulator | PviCFBP13507_19545 | Not Available | Positive | 4336447 - 4337154 | 26783.9 |
| methylisocitrate lyase | PviCFBP13507_19550 | Not Available | Positive | 4337151 - 4338044 | 32079.5 |
| 2-methylcitrate synthase | PviCFBP13507_19555 | Not Available | Positive | 4338186 - 4339313 | 42022.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
