Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | PviCFBP13507_19455 | Not Available | Positive | 4320761 - 4321366 | 21356.0 |
| hypothetical protein | PviCFBP13507_19460 | Not Available | Positive | 4321423 - 4321704 | 10602.0 |
| hypothetical protein | PviCFBP13507_19465 | Not Available | Positive | 4321807 - 4322772 | 34247.4 |
| hypothetical protein | PviCFBP13507_19475 | Not Available | Negative | 4323406 - 4323657 | 8813.3 |
| n-acetyltransferase | PviCFBP13507_19480 | Not Available | Positive | 4324263 - 4324544 | 10657.6 |
| 3-deoxy-7-phosphoheptulonate synthase | PviCFBP13507_19485 | Not Available | Negative | 4324616 - 4325704 | 39361.1 |
| thioredoxin | PviCFBP13507_19490 | Not Available | Positive | 4325926 - 4326261 | 12122.6 |
| putative 2-dehydropantoate 2-reductase | PviCFBP13507_19495 | Not Available | Positive | 4326287 - 4327243 | 34160.3 |
| 5'-nucleotidase | PviCFBP13507_19500 | Not Available | Positive | 4327262 - 4328170 | 33111.1 |
| universal stress protein | PviCFBP13507_19505 | Not Available | Positive | 4328262 - 4328756 | 18275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
