Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit b | PviCFBP13507_19355 | Not Available | Positive | 4297937 - 4300003 | 72742.4 |
| potassium-transporting atpase subunit c | PviCFBP13507_19360 | Not Available | Positive | 4300063 - 4300635 | 19817.9 |
| histidine kinase | PviCFBP13507_19365 | Not Available | Positive | 4300803 - 4303466 | 96634.9 |
| dna-binding response regulator | PviCFBP13507_19370 | Not Available | Positive | 4303522 - 4304214 | 25379.7 |
| hypothetical protein | PviCFBP13507_19375 | Not Available | Positive | 4304754 - 4305032 | 10070.0 |
| aaa family atpase | PviCFBP13507_19380 | Not Available | Positive | 4305231 - 4306148 | 33117.3 |
| duf58 domain-containing protein | PviCFBP13507_19385 | Not Available | Positive | 4306145 - 4307101 | 35428.1 |
| duf3488 domain-containing protein | PviCFBP13507_19390 | Not Available | Positive | 4307098 - 4309101 | 75085.8 |
| chad domain-containing protein | PviCFBP13507_19395 | Not Available | Positive | 4309121 - 4309882 | 28687.9 |
| thioesterase family protein | PviCFBP13507_19400 | Not Available | Positive | 4310018 - 4310815 | 28648.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
