Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_19295 | Not Available | Negative | 4285697 - 4286149 | 17112.4 |
| is66 family transposase | PviCFBP13507_19300 | Not Available | Negative | 4286271 - 4287782 | 56648.1 |
| is66 family insertion sequence hypothetical protein | PviCFBP13507_19315 | Not Available | Negative | 4289591 - 4289896 | 11419.1 |
| hypothetical protein | PviCFBP13507_19320 | Not Available | Negative | 4290271 - 4290738 | 17347.5 |
| hypothetical protein | PviCFBP13507_19325 | Not Available | Negative | 4291297 - 4291788 | 17709.4 |
| hypothetical protein | PviCFBP13507_19330 | Not Available | Negative | 4291788 - 4292153 | 13086.6 |
| sugar-binding protein | PviCFBP13507_19335 | Not Available | Positive | 4292866 - 4295544 | 99334.0 |
| helix-turn-helix transcriptional regulator | PviCFBP13507_19340 | Not Available | Negative | 4295649 - 4295903 | 9559.61 |
| k(+)-transporting atpase subunit f | PviCFBP13507_19345 | Not Available | Positive | 4296134 - 4296223 | 3154.08 |
| potassium-transporting atpase subunit kdpa | PviCFBP13507_19350 | Not Available | Positive | 4296232 - 4297926 | 60208.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
