Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PviCFBP13507_01750 | Not Available | Negative | 409941 - 411143 | 41718.1 |
| 6-phosphogluconolactonase | PviCFBP13507_01755 | Not Available | Positive | 411306 - 412439 | 40357.0 |
| abc-f family atpase | PviCFBP13507_01760 | Not Available | Negative | 412535 - 414124 | 58984.4 |
| integrase | PviCFBP13507_01765 | Not Available | Negative | 414145 - 414255 | 4085.84 |
| chemotaxis protein | PviCFBP13507_01770 | Not Available | Positive | 414624 - 416585 | 70506.2 |
| lipopolysaccharide biosynthesis protein | PviCFBP13507_01775 | Not Available | Negative | 416680 - 417480 | 29395.2 |
| hypothetical protein | PviCFBP13507_01780 | Not Available | Positive | 417829 - 418290 | 15819.8 |
| duf3053 domain-containing protein | PviCFBP13507_01785 | Not Available | Positive | 418476 - 419177 | 25637.7 |
| hypothetical protein | PviCFBP13507_01790 | Not Available | Positive | 419329 - 419526 | 7175.49 |
| gnat family n-acetyltransferase | PviCFBP13507_01795 | Not Available | Positive | 419632 - 420198 | 20606.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
