Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_19195 | Not Available | Positive | 4265849 - 4266721 | 33916.4 |
| transcriptional regulator | PviCFBP13507_19200 | Not Available | Negative | 4266782 - 4267156 | 13469.5 |
| atp-dependent helicase | PviCFBP13507_19205 | Not Available | Negative | 4267454 - 4268791 | 48739.4 |
| thermostable hemolysin | PviCFBP13507_19210 | Not Available | Positive | 4269054 - 4269731 | 24379.0 |
| long-chain acyl-coa synthetase | PviCFBP13507_19215 | Not Available | Positive | 4269721 - 4271214 | 54460.0 |
| biliverdin-producing heme oxygenase | PviCFBP13507_19220 | Not Available | Positive | 4271211 - 4271900 | 25668.6 |
| short chain dehydrogenase | PviCFBP13507_19225 | Not Available | Positive | 4271887 - 4272696 | 28968.2 |
| hypothetical protein | PviCFBP13507_19230 | Not Available | Positive | 4272693 - 4273340 | 23779.4 |
| dna-binding response regulator | PviCFBP13507_19235 | Not Available | Positive | 4273351 - 4274013 | 24651.7 |
| two-component sensor histidine kinase | PviCFBP13507_19240 | Not Available | Positive | 4274010 - 4275377 | 50572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
