Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | PviCFBP13507_19145 | Not Available | Negative | 4258756 - 4259295 | 20115.3 |
| yihy/virulence factor brkb family protein | PviCFBP13507_19150 | Not Available | Negative | 4259323 - 4260312 | 36323.0 |
| csbd family protein | PviCFBP13507_19155 | Not Available | Negative | 4260539 - 4260730 | 6458.65 |
| hypothetical protein | PviCFBP13507_19160 | Not Available | Positive | 4260976 - 4261356 | 14610.7 |
| duf2177 domain-containing protein | PviCFBP13507_19165 | Not Available | Negative | 4261614 - 4262015 | 14227.8 |
| disulfide bond formation protein dsba | PviCFBP13507_19170 | Not Available | Positive | 4262169 - 4262801 | 23903.7 |
| gntr family transcriptional regulator | PviCFBP13507_19175 | Not Available | Negative | 4262844 - 4263680 | 30975.2 |
| hypothetical protein | PviCFBP13507_19180 | Not Available | Positive | 4264029 - 4264208 | 6166.45 |
| hypothetical protein | PviCFBP13507_19185 | Not Available | Positive | 4264377 - 4264889 | 18849.3 |
| hypothetical protein | PviCFBP13507_19190 | Not Available | Positive | 4265037 - 4265765 | 26461.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
