Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2058 domain-containing protein | PviCFBP13507_18830 | Not Available | Negative | 4191430 - 4191972 | 20390.4 |
| nucleoside triphosphate pyrophosphohydrolase | PviCFBP13507_18835 | Not Available | Negative | 4191999 - 4192832 | 31650.5 |
| gtp diphosphokinase | PviCFBP13507_18840 | Not Available | Negative | 4192908 - 4195151 | 83905.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | PviCFBP13507_18845 | Not Available | Negative | 4195309 - 4196664 | 49343.5 |
| cysteine synthase b | PviCFBP13507_18850 | Not Available | Negative | 4196664 - 4197566 | 32538.0 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_18855 | Not Available | Positive | 4197814 - 4200567 | 100553.0 |
| hydroxyacid dehydrogenase | PviCFBP13507_18860 | Not Available | Positive | 4200747 - 4201736 | 35340.6 |
| hypothetical protein | PviCFBP13507_18865 | Not Available | Positive | 4201782 - 4202219 | 16270.6 |
| meta domain-containing protein | PviCFBP13507_18870 | Not Available | Positive | 4202216 - 4202623 | 15184.3 |
| tlpa family protein disulfide reductase | PviCFBP13507_18875 | Not Available | Negative | 4202875 - 4203342 | 16910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
