Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan endopeptidase | PviCFBP13507_18775 | Not Available | Negative | 4182218 - 4182760 | 19160.1 |
| peptidase p60 | PviCFBP13507_18780 | Not Available | Negative | 4182855 - 4183577 | 26104.2 |
| nad-dependent protein deacylase | PviCFBP13507_18785 | Not Available | Negative | 4183653 - 4184396 | 26985.7 |
| dnaa regulatory inactivator hda | PviCFBP13507_18790 | Not Available | Negative | 4184411 - 4185115 | 26650.4 |
| ai-2e family transporter | PviCFBP13507_18795 | Not Available | Negative | 4185332 - 4186405 | 38588.1 |
| duf2066 domain-containing protein | PviCFBP13507_18800 | Not Available | Negative | 4186445 - 4187530 | 38375.7 |
| phosphoribosylformylglycinamidine cyclo-ligase | PviCFBP13507_18810 | Not Available | Positive | 4187886 - 4188944 | 37085.0 |
| phosphoribosylglycinamide formyltransferase | PviCFBP13507_18815 | Not Available | Positive | 4188944 - 4189594 | 23614.4 |
| duf3108 domain-containing protein | PviCFBP13507_18820 | Not Available | Positive | 4189603 - 4190316 | 26342.4 |
| hypothetical protein | PviCFBP13507_18825 | Not Available | Positive | 4191182 - 4191361 | 6863.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
