Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | PviCFBP13507_18625 | Not Available | Negative | 4151836 - 4154298 | 91091.5 |
| abc transporter atp-binding protein | PviCFBP13507_18630 | Not Available | Negative | 4154421 - 4156247 | 66777.0 |
| dsba family protein | PviCFBP13507_18635 | Not Available | Negative | 4156240 - 4156872 | 23072.3 |
| rhodanese domain-containing protein | PviCFBP13507_18640 | Not Available | Negative | 4156876 - 4157826 | 35755.2 |
| bola family transcriptional regulator | PviCFBP13507_18645 | Not Available | Negative | 4157997 - 4158290 | 10674.7 |
| duf2059 domain-containing protein | PviCFBP13507_18650 | Not Available | Negative | 4158303 - 4158830 | 18807.9 |
| class ii fumarate hydratase | PviCFBP13507_18655 | Not Available | Positive | 4159000 - 4160394 | 49124.9 |
| flavodoxin family protein | PviCFBP13507_18660 | Not Available | Positive | 4160387 - 4161001 | 23106.0 |
| eama/rhat family transporter | PviCFBP13507_18665 | Not Available | Negative | 4161008 - 4161967 | 34631.1 |
| dtw domain-containing protein | PviCFBP13507_18670 | Not Available | Negative | 4162082 - 4162684 | 21945.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
