Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | PviCFBP13507_18525 | Not Available | Negative | 4127850 - 4128182 | 11744.0 |
| polysaccharide biosynthesis protein | PviCFBP13507_18530 | Not Available | Negative | 4128341 - 4130335 | 73681.5 |
| glycosyl transferase | PviCFBP13507_18535 | Not Available | Negative | 4130434 - 4131450 | 36128.0 |
| nad-dependent dehydratase | PviCFBP13507_18540 | Not Available | Negative | 4131443 - 4132420 | 35556.0 |
| mbl fold metallo-hydrolase | PviCFBP13507_18545 | Not Available | Negative | 4132636 - 4134066 | 52192.5 |
| duf1049 domain-containing protein | PviCFBP13507_18550 | Not Available | Negative | 4134464 - 4134715 | 9210.86 |
| integration host factor subunit beta | PviCFBP13507_18555 | Not Available | Negative | 4134739 - 4135035 | 11042.3 |
| 30s ribosomal protein s1 | PviCFBP13507_18560 | Not Available | Negative | 4135332 - 4137017 | 62018.6 |
| (d)cmp kinase | PviCFBP13507_18565 | Not Available | Negative | 4137140 - 4137829 | 24668.5 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | PviCFBP13507_18570 | Not Available | Negative | 4137826 - 4139430 | 56341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
