Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | PviCFBP13507_18225 | Not Available | Negative | 4081148 - 4081582 | 15195.4 |
| 50s ribosomal protein l30 | PviCFBP13507_18230 | Not Available | Negative | 4081586 - 4081762 | 6525.29 |
| 30s ribosomal protein s5 | PviCFBP13507_18235 | Not Available | Negative | 4081765 - 4082265 | 17694.6 |
| 50s ribosomal protein l18 | PviCFBP13507_18240 | Not Available | Negative | 4082269 - 4082619 | 12604.3 |
| 50s ribosomal protein l6 | PviCFBP13507_18245 | Not Available | Negative | 4082630 - 4083163 | 19266.3 |
| 30s ribosomal protein s8 | PviCFBP13507_18250 | Not Available | Negative | 4083176 - 4083568 | 14060.2 |
| 30s ribosomal protein s14 | PviCFBP13507_18255 | Not Available | Negative | 4083782 - 4084087 | 11474.2 |
| 50s ribosomal protein l5 | PviCFBP13507_18260 | Not Available | Negative | 4084101 - 4084640 | 20458.2 |
| 50s ribosomal protein l24 | PviCFBP13507_18265 | Not Available | Negative | 4084661 - 4084975 | 11287.9 |
| 50s ribosomal protein l14 | PviCFBP13507_18270 | Not Available | Negative | 4084987 - 4085355 | 13410.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
