Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | PviCFBP13507_01655 | Not Available | Positive | 374102 - 375331 | 45336.9 |
| hypothetical protein | PviCFBP13507_01660 | Not Available | Negative | 375538 - 376884 | 48592.3 |
| exodeoxyribonuclease iii | PviCFBP13507_01665 | Not Available | Negative | 377012 - 377824 | 31004.7 |
| gnat family n-acetyltransferase | PviCFBP13507_01670 | Not Available | Positive | 378016 - 378687 | 25442.5 |
| hypothetical protein | PviCFBP13507_01675 | Not Available | Positive | 378746 - 380473 | 63074.6 |
| hypothetical protein | PviCFBP13507_01680 | Not Available | Positive | 380479 - 384159 | 131408.0 |
| lysr family transcriptional regulator | PviCFBP13507_01685 | Not Available | Positive | 384293 - 385210 | 34177.5 |
| thiol peroxidase | PviCFBP13507_01690 | Not Available | Positive | 385303 - 385803 | 17377.7 |
| multidrug transporter subunit mdta | PviCFBP13507_01695 | Not Available | Positive | 385953 - 387269 | 46924.1 |
| multidrug transporter subunit mdtb | PviCFBP13507_01700 | Not Available | Positive | 387266 - 390376 | 111918.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
