Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | PviCFBP13507_18175 | Not Available | Positive | 4071469 - 4074303 | 104372.0 |
| bacterioferritin | PviCFBP13507_18180 | Not Available | Negative | 4074435 - 4074899 | 18063.7 |
| catalase | PviCFBP13507_18185 | Not Available | Negative | 4075055 - 4076500 | 53593.7 |
| 50s ribosomal protein l17 | PviCFBP13507_18190 | Not Available | Negative | 4076670 - 4077056 | 14497.7 |
| dna-directed rna polymerase subunit alpha | PviCFBP13507_18195 | Not Available | Negative | 4077098 - 4078099 | 36647.9 |
| 30s ribosomal protein s4 | PviCFBP13507_18200 | Not Available | Negative | 4078122 - 4078742 | 23077.8 |
| 30s ribosomal protein s11 | PviCFBP13507_18205 | Not Available | Negative | 4078761 - 4079150 | 13616.4 |
| 30s ribosomal protein s13 | PviCFBP13507_18210 | Not Available | Negative | 4079181 - 4079537 | 13342.5 |
| 50s ribosomal protein l36 | PviCFBP13507_18215 | Not Available | Negative | 4079668 - 4079784 | 4434.66 |
| preprotein translocase subunit secy | PviCFBP13507_18220 | Not Available | Negative | 4079813 - 4081147 | 47901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
