Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | PviCFBP13507_18125 | Not Available | Positive | 4061259 - 4062152 | 32422.6 |
| abc transporter permease | PviCFBP13507_18130 | Not Available | Positive | 4062149 - 4063042 | 32508.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | PviCFBP13507_18135 | Not Available | Positive | 4063039 - 4064160 | 40738.0 |
| glycerophosphoryl diester phosphodiesterase | PviCFBP13507_18140 | Not Available | Positive | 4064169 - 4064930 | 28086.9 |
| inositol monophosphatase | PviCFBP13507_18145 | Not Available | Positive | 4064927 - 4065682 | 26984.3 |
| alkene reductase | PviCFBP13507_18150 | Not Available | Negative | 4065704 - 4066702 | 35608.9 |
| hypothetical protein | PviCFBP13507_18155 | Not Available | Negative | 4066967 - 4067872 | 33096.3 |
| hypothetical protein | PviCFBP13507_18160 | Not Available | Negative | 4067857 - 4068987 | 42530.7 |
| single-stranded dna-binding protein | PviCFBP13507_18165 | Not Available | Negative | 4069322 - 4069876 | 20531.8 |
| mfs transporter | PviCFBP13507_18170 | Not Available | Negative | 4069886 - 4071280 | 49103.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
