Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | PviCFBP13507_18075 | Not Available | Negative | 4048337 - 4049221 | 32636.9 |
| mechanosensitive ion channel protein | PviCFBP13507_18080 | Not Available | Negative | 4049338 - 4051623 | 81735.1 |
| doxx family protein | PviCFBP13507_18085 | Not Available | Negative | 4051748 - 4052182 | 15581.9 |
| alpha/beta hydrolase | PviCFBP13507_18090 | Not Available | Positive | 4052386 - 4053204 | 29918.4 |
| ureidoglycolate lyase | PviCFBP13507_18095 | Not Available | Negative | 4053373 - 4054221 | 30339.3 |
| nad(p)-dependent oxidoreductase | PviCFBP13507_18100 | Not Available | Negative | 4054260 - 4054994 | 25585.7 |
| methylase | PviCFBP13507_18105 | Not Available | Positive | 4055333 - 4056145 | 29228.2 |
| tonb-dependent receptor | PviCFBP13507_18110 | Not Available | Positive | 4056353 - 4058641 | 83196.1 |
| nagc family transcriptional regulator | PviCFBP13507_18115 | Not Available | Negative | 4058654 - 4059784 | 41478.6 |
| glycerol-3-phosphate abc transporter substrate-binding protein | PviCFBP13507_18120 | Not Available | Positive | 4059952 - 4061262 | 48161.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
