Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | PviCFBP13507_17875 | Not Available | Positive | 4010032 - 4011552 | 54880.7 |
| ethanolamine ammonia lyase large subunit | PviCFBP13507_17880 | Not Available | Positive | 4011999 - 4013393 | 50326.0 |
| ethanolamine ammonia-lyase | PviCFBP13507_17885 | Not Available | Positive | 4013390 - 4014268 | 31742.8 |
| gnat family n-acetyltransferase | PviCFBP13507_17890 | Not Available | Positive | 4014354 - 4014815 | 18005.7 |
| deda family protein | PviCFBP13507_17895 | Not Available | Positive | 4015006 - 4015653 | 23687.8 |
| zinc-dependent peptidase | PviCFBP13507_17900 | Not Available | Positive | 4015657 - 4016469 | 30765.8 |
| inorganic diphosphatase | PviCFBP13507_17905 | Not Available | Positive | 4016579 - 4017106 | 19359.1 |
| xre family transcriptional regulator | PviCFBP13507_17910 | Not Available | Positive | 4017445 - 4018182 | 27769.3 |
| hypothetical protein | PviCFBP13507_17915 | Not Available | Negative | 4018354 - 4018533 | 6540.97 |
| glutathione s-transferase | PviCFBP13507_17920 | Not Available | Positive | 4018595 - 4019263 | 25120.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
