Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | PviCFBP13507_17825 | Not Available | Negative | 4002517 - 4003107 | 21493.7 |
| lrgb family protein | PviCFBP13507_17830 | Not Available | Negative | 4003119 - 4003835 | 24819.4 |
| cida/lrga family protein | PviCFBP13507_17835 | Not Available | Negative | 4003832 - 4004194 | 13265.0 |
| dehydratase | PviCFBP13507_17840 | Not Available | Positive | 4004399 - 4004854 | 16820.7 |
| peptidase c13 | PviCFBP13507_17845 | Not Available | Positive | 4004993 - 4006720 | 62077.1 |
| nucleoside-diphosphate sugar epimerase | PviCFBP13507_17850 | Not Available | Positive | 4006748 - 4007389 | 23298.3 |
| hypothetical protein | PviCFBP13507_17855 | Not Available | Positive | 4007386 - 4007511 | 4814.04 |
| ycek/yidq family lipoprotein | PviCFBP13507_17860 | Not Available | Negative | 4007553 - 4007837 | 9500.79 |
| ubix family flavin prenyltransferase | PviCFBP13507_17865 | Not Available | Negative | 4007830 - 4008459 | 22633.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | PviCFBP13507_17870 | Not Available | Negative | 4008456 - 4009805 | 48274.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
