Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | PviCFBP13507_01600 | Not Available | Positive | 361909 - 362931 | 38346.9 |
| fe-s biogenesis protein nfua | PviCFBP13507_01605 | Not Available | Positive | 363032 - 363625 | 21459.2 |
| chemotaxis protein | PviCFBP13507_01610 | Not Available | Positive | 363807 - 365111 | 49129.9 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | PviCFBP13507_01615 | Not Available | Negative | 365198 - 367174 | 71478.4 |
| gamma-carboxygeranoyl-coa hydratase | PviCFBP13507_01620 | Not Available | Negative | 367171 - 368010 | 30513.5 |
| methylcrotonoyl-coa carboxylase | PviCFBP13507_01625 | Not Available | Negative | 368019 - 369626 | 57755.5 |
| isovaleryl-coa dehydrogenase | PviCFBP13507_01630 | Not Available | Negative | 369640 - 370803 | 42463.7 |
| hydroxymethylglutaryl-coa lyase | PviCFBP13507_01640 | Not Available | Negative | 371517 - 372428 | 32079.2 |
| merr family dna-binding transcriptional regulator | PviCFBP13507_01645 | Not Available | Negative | 372446 - 372838 | 15053.2 |
| lysr family transcriptional regulator | PviCFBP13507_01650 | Not Available | Negative | 372985 - 373932 | 35610.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
