Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | PviCFBP13507_17670 | Not Available | Positive | 3969483 - 3971087 | 57531.8 |
| phosphoribosylamine--glycine ligase | PviCFBP13507_17675 | Not Available | Positive | 3971289 - 3972584 | 45643.6 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_17680 | Not Available | Positive | 3972673 - 3975462 | 102828.0 |
| marc family protein | PviCFBP13507_17685 | Not Available | Positive | 3975535 - 3976131 | 21427.0 |
| hypothetical protein | PviCFBP13507_17690 | Not Available | Negative | 3976138 - 3976779 | 23913.0 |
| hypothetical protein | PviCFBP13507_17695 | Not Available | Negative | 3976772 - 3977479 | 26428.6 |
| hypothetical protein | PviCFBP13507_17700 | Not Available | Negative | 3977536 - 3978336 | 29501.1 |
| precorrin-3b c(17)-methyltransferase | PviCFBP13507_17705 | Not Available | Negative | 3978733 - 3980427 | 60018.6 |
| precorrin-2 c(20)-methyltransferase | PviCFBP13507_17710 | Not Available | Negative | 3980427 - 3981158 | 26573.3 |
| precorrin-8x methylmutase | PviCFBP13507_17715 | Not Available | Negative | 3981158 - 3981784 | 22112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
