Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_17620 | Not Available | Positive | 3959968 - 3960696 | 26334.7 |
| duf3613 domain-containing protein | PviCFBP13507_17625 | Not Available | Positive | 3960723 - 3960986 | 9124.39 |
| protein-disulfide reductase dsbd | PviCFBP13507_17630 | Not Available | Positive | 3961063 - 3962883 | 65016.0 |
| type ii 3-dehydroquinate dehydratase | PviCFBP13507_17635 | Not Available | Positive | 3963012 - 3963464 | 16447.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | PviCFBP13507_17640 | Not Available | Positive | 3963544 - 3964002 | 16153.6 |
| acetyl-coa carboxylase biotin carboxylase subunit | PviCFBP13507_17645 | Not Available | Positive | 3964020 - 3965363 | 48717.4 |
| 50s ribosomal protein l11 methyltransferase | PviCFBP13507_17650 | Not Available | Positive | 3965489 - 3966367 | 31915.7 |
| duf3426 domain-containing protein | PviCFBP13507_17655 | Not Available | Positive | 3966392 - 3967753 | 50940.3 |
| trna dihydrouridine synthase dusb | PviCFBP13507_17660 | Not Available | Positive | 3968071 - 3969084 | 36820.4 |
| dna-binding transcriptional regulator fis | PviCFBP13507_17665 | Not Available | Positive | 3969081 - 3969401 | 11722.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
